Journal of Innovative Agriculture, Volume 12, Issue 3 : 10-17. Doi : 10.37446/jinagri/rsa/12.3.2025.10-17
Research Article

OPEN ACCESS | Published on : 01-Sep-2025

Analysis of chlorophyll mutations in EMS-induced mutant population of rice (Oryza sativa L.)

  • Balu Indragandhi Hariharan
  • Department of Genetics and Plant Breeding, SRM College of Agricultural Sciences, SRM Institute of Science and Technology, Chengalpattu-603 201, Tamil Nadu, India.
  • Jegadeeswaran Mokkaraj
  • Department of Genetics and Plant Breeding, SRM College of Agricultural Sciences, SRM Institute of Science and Technology, Chengalpattu-603 201, Tamil Nadu, India.
  • P. Chandrasekaran
  • Department of Basic Sciences, SRM College of Agricultural Sciences, SRM Institute of Science and Technology, Chengalpattu-603 201, Tamil Nadu, India.
  • Arulbalachandran Dhanarajan
  • Division of Crop Stress Physiology and Molecular Biology, Department of Botany, School of Life Sciences, Periyar University, Salem, Tamil Nadu, 636011, India.
  • Thirugnana Kumar S
  • Department of Genetics and Plant Breeding, SRM College of Agricultural Sciences, SRM Institute of Science and Technology, Chengalpattu-603 201, Tamil Nadu, India.
  • Selvakumar Gurunathan
  • Department of Genetics and Plant Breeding, SRM College of Agricultural Sciences, SRM Institute of Science and Technology, Chengalpattu-603 201, Tamil Nadu, India.

Abstract

Background: The purpose of this study was to determine the lethal dose given by the chemical mutagen ethyl-methane sulfonate (EMS) in the high-yielding rice variety ADT43. The frequency of chlorophyll mutations has been analysed in the M2 generation.

Methods:  A pilot study that consisted of treating ten batches of rice seeds using different dosages of ethyl methane sulphonate (EMS) and conducting kill curve analysis was used to determine lethal doses. The M1 population was then divided into three batches, each with EMS dosages of 0.4%, 0.5%, and 0.6%. Three batches of the M2 population, involving the 700, 700, and 700 M2 families, were subsequently exposed to chlorophyll mutation in the subsequent cropping and studied.

Result: The range of the LD50 value is 0.4% to 0.6% EMS. The lethality of the rice increased linearly with a gradual increase in the EMS dosage. At EMS dosages of 0.4%, 0.5%, and 0.6%, the rates of the chlorophyll mutation were 4, 4.57, and 6.14, respectively.

Conclusion: Since the presence of chlorophyll mutants in the M2 generation is confirmed, the reliability of the mutant population is verified to utilise this mutant population to screen for the trait of interest.

Keywords

chlorophyll mutant, EMS, mutation breeding, rice

References

  • Adamu, A. K., & Aliyu, H. (2007). Morphological effects of sodium azide on tomato (Lycopersicon esculentum Mill). Science World Journal2(4).

    da Luz, V. K., Viana, V. E., da Fonseca, G. M., Pegoraro, C., da Maia, L. C., & de Oliveira, A. C. (2021). Identification of rice mutants tolerant to cold stress at the germination stage by TILLING. In Mutation breeding, genetic diversity and crop adaptation to climate change (pp. 111-119). Wallingford UK: CABI.

    Gurunathan, S., Ramadoss, B. R., Mudili, V., Siddaiah, C., Kalagatur, N. K., Bapu, J. R. K., ... & Abd_Allah, E. F. (2019). Single nucleotide polymorphisms in starch biosynthetic genes associated with increased resistant starch concentration in rice mutant. Frontiers in Genetics10, 946.

    Hameed, K., Khan, M. S., Sadaqat, H. A., & Awan, F. S. (2019). Phenotypic characterization of super basmati ethyl methane sulfonate (EMS) induced mutants. Pakistan Journal of Agricultural Sciences56(2).

    Hernández-Muñoz, S., Pedraza-Santos, M. E., López, P. A., Gómez-Sanabria, J. M., & Morales-García, J. L. (2019). Mutagenesis in the improvement of ornamental plants. Revista Chapingo. Serie horticultura25(3), 151-167.

    Jadhav, A. H., Desai, S. S., Bhave, S. G., Mane, A. V., Sawardekar, S. V., Dalvi, V. V., & Bal, C. P. (2023). Optimization of LD50, frequency, and spectrum of chlorophyll mutation, efficiency, and effectiveness of gamma rays in different cultivars of rice (Oryza sativa L.). The Pharma Innovation Journal12(6), 4327-4333.

    Jankowicz-Cieslak, J., Goessnitzer, F., Datta, S., Viljoen, A., Ingelbrecht, I., & Till, B. J. (2021). Induced mutations for generating bananas resistant to Fusarium wilt tropical race 4. In Mutation breeding, genetic diversity and crop adaptation to climate change (pp. 366-378). Wallingford UK: CABI.

    Jia, Y., Wang, Z., Jia, M. H., Rutger, J. N., & Moldenhauer, K. A. (2019). Development and characterization of a large mutant population of a rice variety katy for functional genomics studies and breeding. Crop Breeding, Genetics and Genomics1(2).

    Kumawat, S., Raturi, G., Dhiman, P., Sudhakarn, S., Rajora, N., Thakral, V., ... & Kumar, M. (2022). Opportunity and challenges for whole‐genome resequencing‐based genotyping in plants. Genotyping by sequencing for crop improvement, 38-51.

    Lalitha, R., Mothilal, A., Arunachalam, P., Vanniarajan, C., Senthil, N., Souframanien, J., & Hemalatha, G. (2020). Effectiveness and efficiency of gamma rays and electron beam in M2 generation of Anna (R) 4 rice mutants. Indian Journal of Agricultural Research54(4), 516-520.

    Patial, M., Thakur, S. R., Singh, K. P., & Thakur, A. (2017). Frequency and spectrum of chlorophyll mutations and induced variability in ricebean (Vigna umbellata Thunb, Ohwi and Ohashi). Legume Research-An International Journal40(1), 39-46.

    Phillips, R. L., & Rines, H. W. (2009). Expanding the boundaries of gene variation for crop improvement. Induced Plant Mutations in Genomics Era. Rome: FAO&IAEA, 21-26.

    Prasannakumari, M., Gnanamalar, R. P., Vanniarajan, C., Souframanien, J., Anand, G., Renuka, R., & Singh, R. D. (2024). Impact of electron beam and ethyl methane sulphonate on chlorophyll mutations in rice genotypes ASD 16 and Norungan. Journal of Phytology16, 156-162.

    Pratap, A., & Kumar, J. (2011). Biology and breeding of food legumes (pp. xiv+-418).

    Ramchander, S., Pillai, M. A., & Ushakumari, R. (2014). Effectiveness and Efficiency of Physical and Chemical Mutagens Inducing Chlorophyll Mutants in Two Rice Genotypes. Madras Agricultural Journal101(7-9), 212-218.

    Sagel, Z. (2017). Determination of effect of chemical mutagen EMS on TAEK A-3 and TAEK C-10 mutant soybean varieties in M1 generation. Ekin Journal of Crop Breeding and Genetics3(1), 19-24.

    Sellapillai, L., Dhanarajan, A., Raina, A., & Ganesan, A. (2022). Gamma ray induced positive alterations in morphogenetic and yield attributing traits of finger millet (Eleusine coracana (L.) Gaertn.) in M2 generation. Plant Science Today9(4), 939-949.

    Stadler, L. J., & Roman, H. (1948). The effect of X-rays upon mutation of the gene A in maize. Genetics33(3), 273.

    Unan, R., Deligoz, I., Al-Khatib, K., & Mennan, H. (2022). Protocol for ethyl methanesulphonate (EMS) mutagenesis application in rice. Open Research Europe1, 19.